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Sampling effort and information quality provided by rare and common species in estimating assemblage structure

Year of publication

2020

Authors

Sgarbi, Luciano F.; Bini, Luis M.; Heino, Jani; Jyrkänkallio-Mikkola, Jenny; Landeiro, Victor L.; Santos, Edineusa P.; Schneck, Fabiana; Siqueira, Tadeu; Soininen, Janne; Tolonen, Kimmo T.; Melo, Adriano S.

Abstract

Reliable biological assessments are essential to answer ecological and management questions but require well-designed studies and representative sample sizes. However, large sampling effort is rarely possible, because it demands large financial resources and time, restricting the number of sites sampled, the duration of the study and the sampling effort at each site. In this context, we need methods and protocols allowing cost-effective surveys that would, consequently, increase the knowledge about how biodiversity is distributed in space and time. Here, we assessed the minimal sampling effort required to correctly estimate the assemblage structure of stream insects sampled in near-pristine boreal and subtropical regions. We used five methods grouped into two different approaches. The first approach consisted of the removal of individuals 1) randomly or 2) based on a count threshold. The second approach consisted of simplification in terms of 1) sequential removal from rare to common species; 2) sequential removal from common to rare species; and 3) random species removal. The reliability of the methods was assessed using Procrustes analysis, which indicated the correlation between a reduced matrix (after removal of individuals or species) and the complete matrix. In many cases, we found a strong relationship between ordination patterns derived from presence/absence data (the extreme count threshold of a single individual) and those patterns derived from abundance data. Also, major multivariate patterns derived from the complete data matrices were retained even after the random removal of more than half of the individuals. Procrustes correlation was generally high (>0.8), even with the removal of 50% of the species. Removal of common species produced lower correlation than removal of rare species, indicating higher importance of the former to estimate resemblance between assemblages. Thus, we conclude that sampling designs can be optimized by reducing the sampling effort at a site. We recommend that such efforts saved should be redirected to increase the number of sites studied and the duration of the studies, which is essential to encompass larger spatial, temporal and environmental extents, and increase our knowledge of biodiversity.
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Organizations and authors

University of Helsinki

Soininen Janne

Jyrkankallio-Mikkola Jenny

Finnish Environment Institute

Heino Jani

Tolonen Kimmo T.

Publication type

Publication format

Article

Parent publication type

Journal

Article type

Original article

Audience

Scientific

Peer-reviewed

Peer-Reviewed

MINEDU's publication type classification code

A1 Journal article (refereed), original research

Publication channel information

Parent publication name

Ecological Indicators

Volume

110

Article number

105937

​Publication forum

54970

​Publication forum level

1

Open access

Open access in the publisher’s service

Yes

Open access of publication channel

Fully open publication channel

Self-archived

Yes

License of the self-archived publication

CC BY NC ND

Other information

Fields of science

Ecology, evolutionary biology

Keywords

[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

Publication country

Netherlands

Internationality of the publisher

International

Language

English

International co-publication

Yes

Co-publication with a company

No

DOI

10.1016/j.ecolind.2019.105937

The publication is included in the Ministry of Education and Culture’s Publication data collection

Yes