Foundations of Safe and Complete Algorithms with Applications

Description of the granted funding

Many real-world problems are modeled as computational problems, but unfortunately with incomplete data or knowledge. As such, they may admit a large number of solutions, and we have no way of finding the correct one. This issue is sometimes addressed by enumerating all solutions, which is infeasible for many practical problems. This project aims to construct a general methodology for finding the set of all, safe, sub-solutions that we can trust to be part of the correct solution. Our main motivation comes from Bioinformatics, from high-throughput sequencing of DNA. One main problem is to assemble this data back into the original DNA sequence. As sequencing technologies go from research labs to hospitals, we need solutions that are first of all accurate. We aim at a mathematical leap into understanding all that can be safely reported from the data. Our idea changes the perspective from which we address real-world problems and could spur a new line of research in Computer Science.
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Starting year

2019

End year

2024

Granted funding

Alexandru Ioan Tomescu Orcid -palvelun logo
438 874 €

Related funding decisions

352821
Research costs of Academy Research Fellows(2022)
159 888 €
328877
Research costs of Academy Research Fellows(2019)
209 564 €

Funder

Research Council of Finland

Funding instrument

Academy research fellows

Other information

Funding decision number

322595

Fields of science

Biomedicine

Research fields

Systeemibiologia, bioinformatiikka

Identified topics

computer science, information science, algorithms