Future Methods for Identifying Interacting Genes using Dynamic Gene Network Inference

Description of the granted funding

This project aims at developing new statistical methods for estimating more realistic network structures using biological measurements. Typical setting in biology is that large number of genes are measured from small number of individuals which makes gene network estimation as a difficult task. We consider time course data where own network is estimated for each time-point and information from adjacent time-points is utilized during estimation. One target is to try to better incorporate information from continuous phenotypes to be part of the gene network construction process so that only phenotypically relevant information can be found in the resulting network. If successful, this will give us hint about how certain genes are functionally connected to the phenotype. The new statistical methods that are developed during the project will have lot of applications in medical and biological research.
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Starting year

2023

End year

2026

Granted funding

Mikko Sillanpää Orcid -palvelun logo
493 848 €

Funder

Research Council of Finland

Funding instrument

Academy projects

Decision maker

Scientific Council for Natural Sciences and Engineering
21.06.2022

Other information

Funding decision number

349393

Fields of science

Statistics and probability

Research fields

Tilastotiede

Identified topics

computer science, information science, algorithms