Infrastructure for Single Cell Capture and Processing
Abbreviation
SC-infra
Infrastructure description
SC-infra -network aims at bringing the latest single-cell genomics tools available for the research community in Finland thus promoting high level research international competence and attractiveness of Finland as a research environment. Availability of the modern single cell techniques is not only important for advancing excellence in basic research, but also for creating platform for development of novel innovations and commercial applications. The collaborators of the consortium aim to build a national infrastructure and expertise for single cell processing. Different in-depth expertise and capabilities will be developed in each center based on the research areas and technology expertise.
Scientific description
Start of activity
2016
Responsible organisation
Keywords
core facility, DNA, epigenomics, genotyping, national infrastructure, next generation sequencing, NGS, RNA, single cells, transcriptomics
Research infrastructure services
Single-cell RNA-Seq with capture instruments
Single-cell DNA-Seq
Targeted sequencing after capture of single cells
Single-cell capture, transcriptome and epigenome analysis
Perturbation assays with Fluidigm Polaris
Single-cell RNA-Seq with DropSeq protocol
Custom assays with DropSeq and index sorted plates with STRT
Other information
Fields of science
MEDICAL AND HEALTH SCIENCES
Classifications
Contact information
Name
Descriptio
urn:nbn:fi:research-infras-2016111639