Karkman Antti
Description
Keywords
microbiology, computational biology, antibiotic resistance
Affiliations
University of Helsinki
Primary
Primary
Source: ORCID
University of Helsinki
Maatalous-metsätieteellinen tiedekunta
2023 - present
Source: University of Helsinki
University of Helsinki
Maatalous-metsätieteellinen tiedekunta
2021 - present
Source: University of Helsinki
University of Helsinki
Maatalous-metsätieteellinen tiedekunta
2022 - 2023
Source: University of Helsinki
University of Helsinki
Maatalous-metsätieteellinen tiedekunta
2018 - 2022
Source: University of Helsinki
Göteborgs Universitet
Post doc
Department of Infectious Diseases
2017 - 2018
Source: ORCID
University of Helsinki
Postdoctoral fellow
Department of Biosciences
2015 - 2016
Source: ORCID
Education (2)
PhD
2009 - 2015
University of Helsinki
MSc.
2002 - 2008
University of Helsinki
Publications (50)
2026
Open access
Peer-reviewed
Replacing animal-sourced with plant-sourced proteins alters gut microbiota and biomarkers associated with colorectal cancer risk in healthy adults: A randomized feeding study
Long-read metagenomics and methylation-based binning allow the description of the emerging high-risk antibiotic resistance genes and their hidden hosts in complex communities
Granted funding (2)
2026
Risks and Mitigation of Antimicrobial Resistance Across One Health Sectors – AMaRONE
Research Council of Finland
2026 - 2030
2018
STAR-DUST
Academy of Finland
2018 - 2021
Activities and awards (9)
Reviewer of a scientific journal
Reviewer
SpringerNature
2026
International collaboration: No
Other activity
Sulfonamide resistance gene sul4 is hosted by common wastewater sludge bacteria and found in various newly described contexts and hosts including clinically relevant species
2025
International collaboration: No
Reviewer of a scientific journal
Reviewer
Microbiology Society
2023
International collaboration: No