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Year

Machine learning identifies robust matrisome markers and regulatory mechanisms in cancer

Peer-reviewed
Open access
DOI
10.3390/ijms21228837
Kääriäinen, Anni; Pesola, Vilma; Dittmann, Annalena; Kontio, Juho; Koivunen, Jarkko; Pihlajaniemi, T...
International journal of molecular sciences2020

Integration of Matrisome Omics: Towards System Biology of the Tumor Matrisome

Peer-reviewed
DOI
10.1007/978-3-030-58330-9_7
Valerio Izzi, Jarkko Koivunen, Pekka Rappu, Jyrki Heino, Taina Pihlajaniemi
Springer2020

Pan-Cancer analysis of the expression and regulation of matrisome genes across 32 tumor types

Peer-reviewed
Open access
DOI
10.1016/j.mbplus.2019.04.001
Izzi, Valerio; Lakkala, Juho; Devarajan, Raman; Kääriäinen, Anni; Koivunen, Jarkko; Heljasvaara, Rit...
Matrix biology plus2019

The Burden of Post-Translational Modification (PTM)-Disrupting Mutations in the Tumor Matrisome

Peer-reviewed
Open access
DOI
10.3390/cancers13051081
Holstein, Elisa; Dittmann, Annalena; Kääriäinen, Anni; Pesola, Vilma; Koivunen, Jarkko; Pihlajaniemi...
Cancers2021

The Alternative Matrisome: alternative splicing of ECM proteins in development, homeostasis and tumor progression

Peer-reviewed
Open access
DOI
10.1016/j.matbio.2022.05.003
Rekad, Zeinab; Izzi, Valerio; Lamba, Rijuta; Ciais, Delphine; Van Obberghen-Schilling, Ellen
Matrix biology2022

Matrisome alterations in obesity-Adipose tissue transcriptome study on monozygotic weight-discordant twins

Peer-reviewed
DOI
10.1016/j.matbio.2022.02.005
Kaartinen, Mari T.; Hang, Anny; Barry, Amadou; Arora, Mansi; Heinonen, Sini; Lundbom, Jesper; Hakkar...
Matrix biology2022

Proteome-wide and matrisome-specific atlas of the human ovary computes fertility biomarker candidates and open the way for precision oncofertility

Peer-reviewed
DOI
10.1016/j.matbio.2022.03.005
Ouni, Emna; Nedbal, Valerie; Da Pian, Marta; Cao, Hangbao; Haas, Kalina T.; Peaucelle, Alexis; Van K...
Matrix biology2022

Inflammation-related citrullination of matrisome proteins in human cancer

Peer-reviewed
Open access
DOI
10.3389/fonc.2022.1035188
Rappu Pekka, Suwal Ujjwal, Siljamäki Elina, Heino Jyrki
Frontiers in Oncology2022

Deciphering the role of matrisome genes in 32 tumors : focusing on the role of the extracellular matrix in acute myeloid leukemia and collagen XVIII in normal and leukemic hematopoiesis

Lakkala, Juho
Faculty of biochemisty and molecular medicine2021

Co-evolution of matrisome and adaptive adhesion dynamics drives ovarian cancer chemoresistance

Peer-reviewed
Open access
DOI
10.1038/s41467-021-24009-8
Pietilä, Elina A.; Gonzalez-Molina, Jordi; Moyano-Galceran, Lidia; Jamalzadeh, Sanaz; Zhang, Kaiyang...
Nature communications2021

Machine learning identifies robust matrisome markers and regulatory mechanisms in cancer

Peer-reviewed
Open access
DOI
10.3390/ijms21228837
2020

Integration of Matrisome Omics: Towards System Biology of the Tumor Matrisome

Peer-reviewed
DOI
10.1007/978-3-030-58330-9_7
2020

Pan-Cancer analysis of the expression and regulation of matrisome genes across 32 tumor types

Peer-reviewed
Open access
DOI
10.1016/j.mbplus.2019.04.001
2019

The Burden of Post-Translational Modification (PTM)-Disrupting Mutations in the Tumor Matrisome

Peer-reviewed
Open access
DOI
10.3390/cancers13051081
2021

The Alternative Matrisome: alternative splicing of ECM proteins in development, homeostasis and tumor progression

Peer-reviewed
Open access
DOI
10.1016/j.matbio.2022.05.003
2022

Matrisome alterations in obesity-Adipose tissue transcriptome study on monozygotic weight-discordant twins

Peer-reviewed
DOI
10.1016/j.matbio.2022.02.005
2022

Proteome-wide and matrisome-specific atlas of the human ovary computes fertility biomarker candidates and open the way for precision oncofertility

Peer-reviewed
DOI
10.1016/j.matbio.2022.03.005
2022

Inflammation-related citrullination of matrisome proteins in human cancer

Peer-reviewed
Open access
DOI
10.3389/fonc.2022.1035188
2022

Deciphering the role of matrisome genes in 32 tumors : focusing on the role of the extracellular matrix in acute myeloid leukemia and collagen XVIII in normal and leukemic hematopoiesis

2021

Co-evolution of matrisome and adaptive adhesion dynamics drives ovarian cancer chemoresistance

Peer-reviewed
Open access
DOI
10.1038/s41467-021-24009-8
2021