Andersson et al, 2024, transcriptomic and epigenomic data

Andersson et al, 2024, transcriptomic and epigenomic data

Description

This repository contains raw and processed data described in Andersson et al. (2024) and pertaining to following three experiments: 1) RNA-seq of Dm-aKG treated intestinal stem cells (ISCs) and controls 2) Enzymatic 5hmC-seq of Dm-aKG treated ISCs and controls 3) whole-genome oxidative bisulfite sequencing of ISC^Old-mitochondria, ISC^Young-mitochondria, transit amplifying cells, and Paneth cells. For additional information on data sets, see "Andersson_README.txt" located at the root directory.
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Year of publication

2024

Authors

Biotekniikan instituutti

Arto Viitanen Orcid -palvelun logo - Creator, Publisher

Pekka Katajisto Orcid -palvelun logo - Rights holder

Simon Andersson Orcid -palvelun logo - Contributor

Other information

Fields of science

Biochemistry, cell and molecular biology; Genetics, developmental biology, physiology

Language

English

Open access

Open

License

Creative Commons Attribution 4.0 International (CC BY 4.0)

Keywords

mitochondria, aKG supplementation, Intestinal stem cell, Methylation, Mouse intestine

Subject headings

transcriptome, DNA methylation, intestines