Combining StarDist and TrackMate example 3 - Flow chamber dataset

Description

Description: Contains a StarDist example training dataset, a test dataset, and the StarDist model generated using ZeroCostDL4Mic (see https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist) Training dataset: Paired microscopy images (brightfield) and corresponding masks Microscopy data type: brightfield microscopy and masks obtained via manual segmentation (see https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist for details about the segmentation) Microscope: Images were acquired with a brightfield microscope (Zeiss Laser-TIRF 3 Imaging System, Carl Zeiss) and a 10X objective. File format: .tif (8-bit for brightfield images and 8 and 16-bit for the masks) Image size: 1024x1024 (Pixel size: 650 nm)
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Year of publication

2020

Type of data

Authors

Zenodo - Publisher

Gautier Follain - Creator

Guillaume Jacquemet Orcid -palvelun logo - Creator

Project

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Fields of science

Biochemistry, cell and molecular biology

Language

Open access

Open

License

Creative Commons Attribution 4.0 International (CC BY 4.0)

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