Combining StarDist and TrackMate example 3 - Flow chamber dataset
Description
Description: Contains a StarDist example training dataset, a test dataset, and the StarDist model generated using ZeroCostDL4Mic (see https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist) Training dataset: Paired microscopy images (brightfield) and corresponding masks Microscopy data type: brightfield microscopy and masks obtained via manual segmentation (see https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist for details about the segmentation) Microscope: Images were acquired with a brightfield microscope (Zeiss Laser-TIRF 3 Imaging System, Carl Zeiss) and a 10X objective. File format: .tif (8-bit for brightfield images and 8 and 16-bit for the masks) Image size: 1024x1024 (Pixel size: 650 nm)
Show moreYear of publication
2020
Type of data
Authors
Zenodo - Publisher
Gautier Follain - Creator
Project
Other information
Fields of science
Biochemistry, cell and molecular biology
Language
Open access
Open