Data for manuscript "Emulator-based calibration of a dynamic grassland model using recurrent neural networks and Hamiltonian Monte Carlo" by Aakula et al.

Data for manuscript "Emulator-based calibration of a dynamic grassland model using recurrent neural networks and Hamiltonian Monte Carlo" by Aakula et al.

Description

Data and python code for the manuscript "Emulator-based calibration of a dynamic grassland model using recurrent neural networks and Hamiltonian Monte Carlo", for performing emulator hyperparameter optimization and training. Python file optimize_LSTM_emulator.py can be used either for training an LSTM emulator with predefined hyperparameters or to optimize hyperparameters from a given hyperparameter space. The training data for each fold is included in the files of shape training_data_fold_{}.parquet. The data is obtained from model simulations, including model inputs (meteorological forcings obtained from ERA5 data), model parameters (sampled from distributions defined in the manuscript) and model (BASGRA) outputs. Text file examples.txt gives instructions and examples on running the script.
Show more

Year of publication

2025

Authors

Viivi Aakula - Creator, Contributor

Julius Vira - Contributor

Other information

Fields of science

Geosciences

Language

English

Open access

Open

License

Creative Commons Attribution 4.0 International (CC BY 4.0)

Keywords

INSPIRE theme: environment, Agroecosystem modeling; BASGRA; Neural network; Emulation; Training data; Hyperparameter optimization; Carbon balance
Data for manuscript "Emulator-based calibration of a dynamic grassland model using recurrent neural networks and Hamiltonian Monte Carlo" by Aakula et al. - Research.fi