Mining of wastewater metagenomic data to identify population health and disease trends

Description of the granted funding

Wastewater-Based Epidemiology is a new tool that can provide a complementary approach to current infectious disease surveillance and an early warning system for disease outbreaks. Rapid advances in high-throughput sequencing technologies have decreased sequencing costs and thus revolutionized disease surveillance. In this project, we will explore the total pooled metagenome from wastewater treatment plants, as a trusted source reflecting community-level population health data. We will evaluate the association between the health records in a given locality and the corresponding wastewater metagenomic signatures. This project aims to identify disease risk indicators using bioinformatics and data science, including machine learning. Furthermore, the research produces a cost-effective community-level method to generate health information for infection epidemiology and population health research.
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Starting year

2023

End year

2027

Granted funding


Tarja Pitkänen Orcid -palvelun logo
299 998 €

Role in consortium of the Academy of Finland

Partner

Other consortium parties

Leader
Tampere University (355135)
400 000 €

Funder

Research Council of Finland

Funding instrument

Academy projects

Decision maker

Scientific Council for Biosciences, Health and the Environment
30.05.2023

Other information

Funding decision number

355355

Fields of science

Public health care science, environmental and occupational health

Research fields

Kansanterveystiede

Identified topics

genes, genetics