Mining of wastewater metagenomic data to identify population health and disease trends

Description of the granted funding

Wastewater-Based Epidemiology is a new tool that can provide a complementary approach to current infectious disease surveillance and an early warning system for disease outbreaks. Rapid advances in high-throughput sequencing technologies have decreased sequencing costs and thus revolutionized disease surveillance. In this project, we will explore the total pooled metagenome from wastewater treatment plants, as a trusted source reflecting community-level population health data. We will evaluate the association between the health records in a given locality and the corresponding wastewater metagenomic signatures. This project aims to identify disease risk indicators using bioinformatics and data science, including machine learning. Furthermore, the research produces a cost-effective community-level method to generate health information for infection epidemiology and population health research.
Show more

Starting year

2023

End year

2027

Granted funding


Tarja Pitkänen Orcid -palvelun logo
299 998 €

Funder

Research Council of Finland

Funding instrument

Academy projects

Other information

Funding decision number

355355

Fields of science

Public health care science, environmental and occupational health

Research fields

Kansanterveystiede

Identified topics

genes, genetics