Computationally intensive modeling of histopathology using generative and predictive AI
Acronym
ComPatAI
Description of the granted funding
Emergence of digital pathology has led to a leap in availability of digitalized whole slide images, providing a wealth of data for developing computational methods for interpreting the images. Realizing the full potential of artificial intelligence based computational pathology requires high-performance computing resources. Here, we study the use of generative and predictive modeling using high-performance computing and modern deep learning based artificial intelligence for histopathology. We develop foundational histology models using self-supervised learning for massive public domain datasets. Further, we extend the possibilities for using unstained, label-free tissue images, reducing the hazardous chemical burden for environment, and enabling tissue interpretation beyond the capabilities of human vision. Further, we will extend cross-modality transforms from label-free histology towards new applications in histogenomic and -proteomic analysis in cancer.
Show moreStarting year
2024
End year
2026
Granted funding
Funder
Research Council of Finland
Funding instrument
Targeted Academy projects
Other information
Funding decision number
359229
Fields of science
Computer and information sciences
Research fields
Laskennallinen tiede
Identified topics
bioinformatics