Deciphering the structural variant landscape of acute myeloid leukemia by integrated optical genome mapping and transcriptome analysis

Description of the granted funding

Adult acute myeloid leukemia (AML) presents significant treatment challenges, with a mere 15% five-year survival rate. This study delves into the structural variations (SVs) in DNA, which are pivotal in the development of cancer yet challenging to analyze with existing techniques. Here, a novel approach is being explored through the use of optical genome mapping (OGM) combined with whole-transcriptome sequencing (WTS). This integration of OGM and WTS is geared towards identifying novel mutated genes and disrupted biological pathways specific to AML. The research aims to correlate genetic findings with clinical data, opening the possibility of discovering new biomarkers and distinct AML subtypes. Such findings could pave the way for more personalized treatment approaches and enhanced patient prognosis. Beyond AML, this study underscores the significance of advanced genomic technologies in broadening our understanding of various cancers and genetic diseases.
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Starting year

2024

End year

2028

Granted funding

Tuomo Mantere Orcid -palvelun logo
643 655 €

Funder

Research Council of Finland

Funding instrument

Academy research fellows

Decision maker

Scientific Council for Biosciences, Health and the Environment
12.06.2024

Other information

Funding decision number

360442

Fields of science

Genetics, developmental biology, physiology

Research fields

Perinnöllisyystiede

Identified topics

cancer