Efficient Minimum Flow Decomposition via Integer Linear Programming

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Efficient Minimum Flow Decomposition via Integer Linear Programming

Year of publication

2022

Authors

Dias, Fernando H.C.; Williams, Lucia; Mumey, Brendan; Tomescu, Alexandru I.

Organizations and authors

University of Helsinki

Tomescu Alexandru I.

Mumey Brendan

Dias Fernando H.C.

Publication type

Publication format

Article

Parent publication type

Journal

Article type

Original article

Audience

Scientific

Peer-reviewed

Peer-Reviewed

MINEDU's publication type classification code

A1 Journal article (refereed), original research

Publication channel information

Journal

Journal of Computational Biology

Parent publication name

Journal of Computational Biology

Volume

29

Issue

11

Pages

1155-1267

ISSN

1066-5277

​Publication forum

59993

​Publication forum level

1

Open access

Open access in the publisher’s service

Yes

Open access of publication channel

Partially open publication channel

License of the publisher’s version

CC BY

Self-archived

Yes

License of the self-archived publication

CC BY

Article processing fee (EUR)

4028

Year of payment for the open publication fee

2022

Other information

Fields of science

Computer and information sciences; Ecology, evolutionary biology

Keywords

diversity; Flow decomposition; integer linear programming; ISOFORM DISCOVERY; multiassembly and RNA assembly; network flow; QUANTIFICATION; Rna-seq data; Transcriptome

Publication country

United States

Internationality of the publisher

International

Language

English

International co-publication

Yes

Co-publication with a company

No

DOI

10.1089/cmb.2022.0257

The publication is included in the Ministry of Education and Culture’s Publication data collection

Yes
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