Computational Integration of TRPV4 Antagonists: 3D QSAR, Molecular Docking, Molecular Dynamics Simulations, ADME/Tox, and Retrosynthesis studies
Year of publication
2024
Authors
Abdelilah Toughzaoui; Oussama Chedadi; Abdellah El Aissouq; Youssef El Ouardi; Mohammed Bouachrine; kamal Moradi; Abdelkrim Ouammou
Abstract
TRPV4 antagonists that could be potential drugs for treatment and management of neuropathic pain. This study was conducted to systematically design several amino derivatives of 2,4'-dimethyl-[4,5'-bithiazol]-2-yl as antagonists. In silico computational methods, such as 3D quantitative structure-activity relationship modeling (3D-QSAR), molecular docking, and pharmacokinetic property assessment (ADMET), were used to discover new compounds with strong antagonistic activity. The best-performing 3D-QSAR model was developed using a partial least squares approach and comparative molecular similarity analysis (CoMSIA). The developed model demonstrated an excellent ability to correlate and predict properties (R2 = 0.932, Q2 = 0.620, and SEE = 0.109). It was observed that variations in biological activity were significantly influenced by interactions with steric, electrostatic, and hydrophobic fields. Molecular docking was used to validate the 3D-QSAR methods and to explain the binding site and interactions between the most active ligands and the receptor. Based on these results, a new series of compounds was predicted. The best-anchored molecules underwent MD simulation to confirm their dynamic behavior and stability, and they also underwent retrosynthetic analysis to assist in their synthesis.
Show moreOrganizations and authors
LUT University
El Ouardi Youssef
Publication type
Publication format
Article
Parent publication type
Journal
Article type
Original article
Audience
ScientificPeer-reviewed
Peer-ReviewedMINEDU's publication type classification code
A1 Journal article (refereed), original researchPublication channel information
Journal
Publisher
Volume
9
Issue
42
Article number
202404026
ISSN
Publication forum
Publication forum level
1
Open access
Open access in the publisher’s service
No
Open access of publication channel
Partially open publication channel
Self-archived
No
Other information
Fields of science
Chemical engineering
Internationality of the publisher
International
International co-publication
Yes
Co-publication with a company
No
DOI
10.1002/slct.202404026
The publication is included in the Ministry of Education and Culture’s Publication data collection
Yes