How to reach optimal estimates of confidence intervals in microscopic counting of phytoplankton?
Year of publication
2021
Authors
Salonen, Ari Heimo Kalevi; Salmi, Pauliina; Keskitalo, Jorma
Abstract
Present practices in the microscopic counting of phytoplankton to estimate the reliability of results rely on the assumption of a random distribution of taxa in sample preparations. In contrast to that and in agreement with the literature, we show that aggregated distribution is common and can lead to over-optimistic confidence intervals, if estimated according to the shortcut procedure of Lund et al. based on the number of counted cells. We found a good linear correlation between the distribution independent confidence intervals for medians and those for parametric statistics so that 95% confidence intervals can be approximated by using a correction factor of 1.4. Instead, the recommendation to estimate confidence intervals from the total number of counted cells according to Lund et al. should be categorically rejected. We further propose the adoption of real-time confidence intervals during microscopic counting as the criterion to define how long counting should be continued. Then each sample can be counted in its individual way to reach the necessary reliability independent of highly different samples. Such a dynamic counting strategy would be the most significant development in the quality control of phytoplankton counting since the early pioneers established the present counting practices in the late 1950s.
Show moreOrganizations and authors
Publication type
Publication format
Article
Parent publication type
Journal
Article type
Original article
Audience
ScientificPeer-reviewed
Peer-ReviewedMINEDU's publication type classification code
A1 Journal article (refereed), original researchPublication channel information
Journal/Series
Parent publication name
Volume
43
Issue
6
Pages
846–852
ISSN
Publication forum
Publication forum level
1
Open access
Open access in the publisher’s service
Yes
Open access of publication channel
Partially open publication channel
License of the publisher’s version
CC BY
Self-archived
Yes
License of the self-archived publication
CC BY
Other information
Fields of science
Statistics and probability; Environmental sciences; Ecology, evolutionary biology; Plant biology, microbiology, virology
Keywords
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Publication country
United Kingdom
Internationality of the publisher
International
Language
English
International co-publication
No
Co-publication with a company
No
DOI
10.1093/plankt/fbab062
The publication is included in the Ministry of Education and Culture’s Publication data collection
Yes