Conserved histidine and tyrosine determine spectral responses through the water network in Deinococcus radiodurans phytochrome

Conserved histidine and tyrosine determine spectral responses through the water network in Deinococcus radiodurans phytochrome

Year of publication

2022

Authors

Lehtivuori, Heli; Rumfeldt, Jessica; Mustalahti, Satu; Kurkinen, Sami; Takala, Heikki

Abstract

Phytochromes are red light-sensing photoreceptor proteins that bind a bilin chromophore. Here, we investigate the role of a conserved histidine (H260) and tyrosine (Y263) in the chromophore-binding domain (CBD) of Deinococcus radiodurans phytochrome (DrBphP). Using crystallography, we show that in the H260A variant, the missing imidazole side chain leads to increased water content in the binding pocket. On the other hand, Y263F mutation reduces the water occupancy around the chromophore. Together, these changes in water coordination alter the protonation and spectroscopic properties of the biliverdin. These results pinpoint the importance of this conserved histidine and tyrosine, and the related water network, for the function and applications of phytochromes.
Show more

Organizations and authors

Tampere University

Lehtivuori Heli Orcid -palvelun logo

University of Jyväskylä

Takala Heikki Orcid -palvelun logo

Lehtivuori Heli Orcid -palvelun logo

Rumfeldt Jessica Orcid -palvelun logo

Kurkinen Sami

Mustalahti Satu

University of Turku

Kurkinen Sami

University of Helsinki

Takala Heikki

Publication type

Publication format

Article

Parent publication type

Journal

Article type

Original article

Audience

Scientific

Peer-reviewed

Peer-Reviewed

MINEDU's publication type classification code

A1 Journal article (refereed), original research

Publication channel information

Volume

21

Issue

11

Pages

1975-1989

​Publication forum

64984

​Publication forum level

1

Open access

Open access in the publisher’s service

Yes

Open access of publication channel

Partially open publication channel

Self-archived

Yes

Other information

Fields of science

Nanotechnology; Biochemistry, cell and molecular biology; Biomedicine

Publication country

United Kingdom

Internationality of the publisher

International

Language

English

International co-publication

No

Co-publication with a company

No

DOI

10.1007/s43630-022-00272-6

The publication is included in the Ministry of Education and Culture’s Publication data collection

Yes

Conserved histidine and tyrosine determine spectral responses through the water network in Deinococcus radiodurans phytochrome - Research.fi